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| Packages that use KMerCounter | |
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| jbil.sequence | |
| Uses of KMerCounter in jbil.sequence |
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| Classes in jbil.sequence that implement KMerCounter | |
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class |
FactorTrie
A factor trie is a trie representing all factors of a given length of a set of sequences. |
class |
Trie
Class representing an extended character trie over a given alphabet. |
class |
TrieForest
Class representing a trie forest. |
| Fields in jbil.sequence declared as KMerCounter | |
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KMerCounter |
MarkovFixedLengthSequenceModel.transitionsTree
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| Constructors in jbil.sequence with parameters of type KMerCounter | |
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MarkovFixedLengthSequenceModel(Alphabet alphabet,
int length,
int order,
KMerCounter transitionsTree)
Constructs a new K-order Markov sequence model. |
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